A minimal SpatialExperiment object used for
demonstrating the spatial artifact detection workflow.
Format
A SpatialExperiment object.
Value
A SpatialExperiment object.
Examples
data(spe_vignette)
spe_vignette
#> class: SpatialExperiment
#> dim: 12971 4965
#> metadata(0):
#> assays(1): counts
#> rownames(12971): ENSG00000244734 ENSG00000123560 ... ENSG00000254089
#> ENSG00000125900
#> rowData names(0):
#> colnames(4965): AAACAACGAATAGTTC-1 AAACAAGTATCTCCCA-1 ...
#> TTGTTTGTATTACACG-1 TTGTTTGTGTAAATTC-1
#> colData names(6): sample_id in_tissue ... sum detected
#> reducedDimNames(0):
#> mainExpName: NULL
#> altExpNames(0):
#> spatialCoords names(2) : pxl_col_in_fullres pxl_row_in_fullres
#> imgData names(0):